CELLxGENE Explorer allows scientists to execute interactive analyses on a dataset to explore how patterns of gene expression are determined by environmental and genetic factors using an interactive speed no-code UI.
welcome/scbrowser/scanpy-pbmc3k.h5ad
When you open CELLxGENE on the file for the first time, a new Latch Pod will be created.
Once you click 'Create', you will see a status that indicates a Latch Pod is Launching.
FAQ: What contributes to the wait time?
cellxgene launch
command is automatically executed on the downloaded file.Start Visualizing!
Navigate to Latch Pods
Open the Pod Manager
Modify Compute
View the Updatted Resources
Can I open multiple h5ad files per Pod?
(Advanced) I'm a developer and want to modify the startup script in my Pod when an h5ad file is selected. How do I do that?
/opt/latch/custom_app
. You can use a code editor like vim
or nano
to modify the script.(Advanced) My Pod is taking unusually long to start (10+ minutes). How can I see the logs to understand what may be wrong?