Output Widgets

Output widgets function as Python classes and can be assigned to variables. They provide interactive ways to display plots and data in your notebook interface.

Below is a comprehensive list of supported output widget types.

Plot Output

The Plot output widget allows you to display matplotlib Figures, SubFigures, Axes, or Plotly figures in your notebook interface.

import matplotlib.pyplot as plt
from lplots.widgets.plot import w_plot

# Create a matplotlib figure
fig, ax = plt.subplots()
ax.plot([1, 2, 3], [1, 2, 3])
ax.set_title("My Plot")

# Display the plot in the notebook
plot = w_plot(
    label="Example Plot", # optional label displayed above the plot
    source=fig
)

label: string optional label displayed above the plot

source: Figure | SubFigure | Axes | BaseFigure the plot object to display. Can be:

Matplotlib Figure
Matplotlib SubFigure
Matplotlib Axes
Plotly Figure (BaseFigure)

key: string optional unique identifier for the widget

Usage Notes

The plot widget automatically detects the plot title from the source object
The widget creates an interactive display of your plot that users can interact with
In the notebook outline, the plot title from the source object will be used if no label is provided

Examples

Matplotlib Axes Example:

import matplotlib.pyplot as plt
from lplots.widgets.plot import w_plot

# Create plot with axes
fig, ax = plt.subplots()
ax.scatter([1,2,3], [1,2,3])
ax.set_title("Scatter Plot")

# Display just the axes
w_plot(source=ax)

Plotly Figure Example:

import plotly.express as px
from lplots.widgets.plot import w_plot

# Create a plotly figure
fig = px.scatter(x=[1,2,3], y=[1,2,3])
fig.update_layout(title="Plotly Scatter")

# Display the plotly figure
w_plot(label="Interactive Plot", source=fig)

Table Output

The Table output widget allows you to display tabular data in an interactive table format.

import pandas as pd
from lplots.widgets.table import w_table

# Create sample dataframe
df = pd.DataFrame({
    'A': [1, 2, 3],
    'B': ['a', 'b', 'c']
})

# Display the table
table = w_table(
    label="Sample Data",
    source=df
)

label: string optional label displayed above the table

source: DataFrame the pandas DataFrame to display

key: string optional unique identifier for the widget

IGV Output

The IGV output widget allows you to visualize and interact with your genomic data.

from lplots.widgets.igv import w_igv, IGVOptions

latch_path = f"latch://<workspace_id>.account/Covid/covid.bam"
index_path = f"latch://<workspace_id>.account/Covid/covid.bam.bai"

options: IGVOptions = {
  "genome": "hg38",
  "tracks": [
    {
      "name": "test",
      "type": "alignment",
      "url": latch_path,
      "indexURL": index_path,
      "minHeight": 100,
      "maxHeight": 200
    }
  ]
}

w_igv(options=options)

options: dict required dictionary of options for configuring the IGV browser. See Browser Creation for a list of available options. See Tracks for configuration options for each track.

Usage Notes

The IGV widget accepts both Latch paths and generic URLs.
If a Latch path is provided without an index, the widget will automatically generate and pull an index for the file.

Output widgets are reactive to changes in their source data. When the source plot or data is updated, the widget display will automatically update to reflect the changes.

Example:

import matplotlib.pyplot as plt
from lplots.widgets.plot import w_plot

# Create initial plot
fig, ax = plt.subplots()
line, = ax.plot([1, 2, 3], [1, 2, 3])
ax.set_title("Dynamic Plot")

# Display the plot
plot = w_plot(label="Updating Plot", source=fig)

# Update the plot data
line.set_ydata([2, 1, 3])
fig.canvas.draw()  # Plot will automatically update in the widget

Plots

Supported Output Widget Types

Widget Parameters

Usage Notes

Examples

Widget Parameters

Widget Parameters

Usage Notes

Output Widget Reactivity

Plots

​Supported Output Widget Types

​Output Widget Reactivity

Supported Output Widget Types

Output Widget Reactivity